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1
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DNA methylation age of human tissues and cell types

Horvath, Steve

2013

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2
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Significant Association of Estrogen Receptor Binding Site Variation with Bipolar Disorder in Females (ER DNA-Binding Variation in Mood Disorders)

Graae, Lisette ; Karlsson, Robert ; Paddock, Silvia ;Horvath, Steve (Editor)

PLoS ONE, 2012, Vol.7(2), p.e32304 [Peer Reviewed Journal]

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3
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Personalized Pathway Enrichment Map of Putative Cancer Genes from Next Generation Sequencing Data (Pathway Enrichment Map of Cancer Mutation Data)

Jia, Peilin ; Zhao, Zhongming ;Horvath, Steve (Editor)

PLoS ONE, 2012, Vol.7(5), p.e37595 [Peer Reviewed Journal]

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4
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Divergence of human and mouse brain transcriptome highlights Alzheimer disease pathways

Miller, Jeremy A. ; Horvath, Steve ; Geschwind, Daniel H. ; Takahashi, Joseph S.

Proceedings of the National Academy of Sciences of the United States of America, 13 July 2010, Vol.107(28), pp.12698-12703 [Peer Reviewed Journal]

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HIV-1 Infection Accelerates Age According to the Epigenetic Clock

Horvath, Steve ; Levine, Andrew J

The Journal of Infectious Diseases, 2015, Vol. 212(10), pp.1563-1573 [Peer Reviewed Journal]

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6
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Consensus Rules in Variant Detection from Next-Generation Sequencing Data (Variant Detection in NGS Data)

Jia, Peilin ; Li, Fei ; Xia, Jufeng ; Chen, Haiquan ; Ji, Hongbin ; Pao, William ; Zhao, Zhongming ;Horvath, Steve (Editor)

PLoS ONE, 2012, Vol.7(6), p.e38470 [Peer Reviewed Journal]

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Conserved Non-Coding Regulatory Signatures in Arabidopsis Co-Expressed Gene Modules (CNS Signatures in Co-Expression Networks)

Spangler, Jacob B ; Ficklin, Stephen P ; Luo, Feng ; Freeling, Michael ; Feltus, F. Alex ;Horvath, Steve (Editor)

2012, Vol.7(9), p.e45041 [Peer Reviewed Journal]

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8
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Resting-State Quantitative Electroencephalography Reveals Increased Neurophysiologic Connectivity in Depression (Brain Functional Connectivity in Major Depression)

Leuchter, Andrew F ; Cook, Ian A ; Hunter, Aimee M ; Cai, Chaochao ; Horvath, Steve ;El-deredy, Wael (Editor)

PLoS ONE, 2012, Vol.7(2), p.e32508 [Peer Reviewed Journal]

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9
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Transcriptomic Analysis of Autistic Brain Reveals Convergent Molecular Pathology

Voineagu, Irina ; Wang, Xinchen ; Johnston, Patrick ; Lowe, Jennifer K ; Tian, Yuan ; Horvath, Steve ; Mill, Jonathan ; Cantor, Rita ; Blencowe, Benjamin J ; Geschwind, Daniel H

Nature, 2011, Vol.474(7351), p.380-384 [Peer Reviewed Journal]

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10
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When Is Hub Gene Selection Better than Standard Meta-Analysis?

Langfelder, Peter ; Mischel, Paul S ; Horvath, Steve ;Ravasi, Timothy (editor)

PLoS ONE, 2013, Vol.8(4) [Peer Reviewed Journal]

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11
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FusionFinder: A Software Tool to Identify Expressed Gene Fusion Candidates from RNA-Seq Data (FusionFinder: Finding Gene Fusions in RNA-Seq Data)

Francis, Richard W ; Thompson-Wicking, Katherine ; Carter, Kim W ; Anderson, Denise ; Kees, Ursula R ; Beesley, Alex H ;Horvath, Steve (Editor)

PLoS ONE, 2012, Vol.7(6), p.e39987 [Peer Reviewed Journal]

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12
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Evaluation of Gene Association Methods for Coexpression Network Construction and Biological Knowledge Discovery (Methods for Coexpression Network Construction)

Kumari, Sapna ; Nie, Jeff ; Chen, Huann-Sheng ; Ma, Hao ; Stewart, Ron ; Li, Xiang ; Lu, Meng-Zhu ; Taylor, William M ; Wei, Hairong ;Horvath, Steve (Editor)

2012, Vol.7(11), p.e50411 [Peer Reviewed Journal]

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13
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Computational Analysis of mRNA Expression Profiles Identifies MicroRNA-29a/c as Predictor of Colorectal Cancer Early Recurrence (Identify miRNA to Predict CRC Recurrence In Silico)

Kuo, Tai-Yue ; Hsi, Edward ; Yang, I-Ping ; Tsai, Pei-Chien ; Wang, Jaw-Yuan ; Juo, Suh-Hang Hank ;Horvath, Steve (Editor)

PLoS ONE, 2012, Vol.7(2), p.e31587 [Peer Reviewed Journal]

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14
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Molecular Microcircuitry Underlies Functional Specification in a Basal Ganglia Circuit Dedicated to Vocal Learning

Hilliard, Austin t ; Miller, Julie e ; Fraley, Elizabeth R ; Horvath, Steve ; White, Stephanie a

Neuron, 09 February 2012, Vol.73(3), pp.537-552 [Peer Reviewed Journal]

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15
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Epigenetic Aging and Immune Senescence in Women With Insomnia Symptoms: Findings From the Women’s Health Initiative Study

Carroll, Judith E ; Irwin, Michael R ; Levine, Morgan ; Seeman, Teresa E ; Absher, Devin ; Assimes, Themistocles ; Horvath, Steve

Biological Psychiatry, 15 January 2017, Vol.81(2), pp.136-144 [Peer Reviewed Journal]

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16
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Transcriptome analyses reveal molecular mechanisms underlying functional recovery after spinal cord injury

Duan, Hongmei ; Ge, Weihong ; Zhang, Aifeng ; Xi, Yue ; Chen, Zhihua ; Luo, Dandan ; Cheng, Yin ; Fan, Kevin S. ; Horvath, Steve ; Sofroniew, Michael V. ; Cheng, Liming ; Yang, Zhaoyang ; Sun, Yi E. ; Li, Xiaoguang

Proceedings of the National Academy of Sciences of the United States of America, 2015, Vol.112(43), pp.13360-13365 [Peer Reviewed Journal]

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17
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Organophosphate pesticide exposure and differential genome-wide DNA methylation

Paul, Kimberly C ; Chuang, Yu-Hsuan ; Cockburn, Myles ; Bronstein, Jeff M ; Horvath, Steve ; Ritz, Beate

Science of the Total Environment, 15 December 2018, Vol.645, pp.1135-1143 [Peer Reviewed Journal]

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18
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Genetic Variation in the Mcp-1 Gene Promoter Associated with the Risk of Polycystic Ovary Syndrome

Li, Lan ; Ryoo, Ji Eun ; Lee, Kyung-Ju ; Choi, Bum-Chae ; Baek, Kwang-Hyun ;Horvath, Steve (editor)

PLoS ONE, 2015, Vol.10(4) [Peer Reviewed Journal]

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19
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A Chemocentric Approach to the Identification of Cancer Targets (Identification of Cancer-Relevant Targets)

Flachner, Beáta ; Lörincz, Zsolt ; Carotti, Angelo ; Nicolotti, Orazio ; Kuchipudi, Praveena ; Remez, Nikita ; Sanz, Ferran ; Tóvári, József ; Szabó, Miklós J ; Bertók, Béla ; Cseh, Sándor ; Mestres, Jordi ; Dormán, György ;Horvath, Steve (Editor)

PLoS ONE, 2012, Vol.7(4), p.e35582 [Peer Reviewed Journal]

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20
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Integrative Functional Genomic Analyses Implicate Specific Molecular Pathways and Circuits in Autism

Parikshak, Neelroop n ; Luo, Rui ; Zhang, Alice ; Won, Hyejung ; Lowe, Jennifer k ; Chandran, Vijayendran ; Horvath, Steve ; Geschwind, Daniel h

Cell, 21 November 2013, Vol.155(5), pp.1008-1021 [Peer Reviewed Journal]

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